Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | PLIM_RS12150 | Not Available | Positive | 3062980 - 3064341 | 49027.6 |
| tetratricopeptide repeat protein | PLIM_RS12155 | Not Available | Positive | 3064798 - 3066039 | 46439.6 |
| lpxi family protein | PLIM_RS12160 | Q9A716 | Negative | 3066300 - 3067184 | 32916.1 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | PLIM_RS12165 | B0UQ03 | Negative | 3067262 - 3068362 | 38677.6 |
| pd-(d/e)xk nuclease family protein | PLIM_RS12170 | Q8RCZ1 | Positive | 3068559 - 3071900 | 123982.0 |
| hypothetical protein | PLIM_RS12175 | Not Available | Positive | 3071964 - 3072827 | 32503.4 |
| hypothetical protein | PLIM_RS12180 | Not Available | Positive | 3073100 - 3074032 | 33462.2 |
| outer membrane protein assembly factor | PLIM_RS12185 | Q9S341 | Negative | 3074072 - 3077395 | 123635.0 |
| 3-deoxy-d-manno-octulosonic acid transferase | PLIM_RS12190 | P0AC77 | Negative | 3077584 - 3078981 | 51761.0 |
| chloride channel protein | PLIM_RS12195 | Q87WD2 | Negative | 3079111 - 3080427 | 46434.9 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
