Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | PLIM_RS11735 | Q818X6 | Positive | 2940537 - 2941808 | 46550.0 |
| carbon storage regulator | PLIM_RS11740 | P0DPD4 | Negative | 2941816 - 2942073 | 9143.01 |
| 50s ribosomal protein l28 | PLIM_RS11745 | Not Available | Positive | 2942614 - 2942874 | 9457.81 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | PLIM_RS11750 | Q8RC41 | Positive | 2943079 - 2943399 | 11610.2 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | PLIM_RS11755 | B4UIV1 | Positive | 2943496 - 2945001 | 52993.7 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | PLIM_RS11760 | Q7UK56 | Positive | 2945085 - 2946602 | 56537.5 |
| duf1080 domain-containing protein | PLIM_RS11765 | Not Available | Positive | 2946839 - 2947663 | 29434.4 |
| aconitate hydratase acna | PLIM_RS11770 | Q9RTN7 | Positive | 2947925 - 2950597 | 95838.6 |
| protoporphyrinogen oxidase | PLIM_RS11775 | P32397 | Negative | 2950673 - 2952202 | 55605.1 |
| uroporphyrinogen decarboxylase | PLIM_RS11780 | A9FZW7 | Negative | 2952248 - 2953309 | 39398.9 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
