Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | PLIM_RS11685 | Not Available | Positive | 2926883 - 2929699 | 104065.0 |
| aspartate carbamoyltransferase catalytic subunit | PLIM_RS11690 | Q7UNR3 | Positive | 2929763 - 2930710 | 34651.9 |
| dihydroorotase | PLIM_RS11695 | Q2LVI3 | Positive | 2930807 - 2932084 | 45377.6 |
| nyn domain-containing protein | PLIM_RS22870 | Not Available | Positive | 2932163 - 2932903 | 28908.8 |
| a24 family peptidase | PLIM_RS11705 | Not Available | Negative | 2932953 - 2933999 | 37123.9 |
| ammonium transporter | PLIM_RS11710 | Q07429 | Positive | 2934213 - 2935616 | 49772.4 |
| p-ii family nitrogen regulator | PLIM_RS11715 | P14179 | Positive | 2935884 - 2936222 | 12403.0 |
| p-ii family nitrogen regulator | PLIM_RS11720 | Q52905 | Positive | 2936550 - 2936888 | 12374.0 |
| [protein-pii] uridylyltransferase | PLIM_RS11725 | Q3J5H6 | Positive | 2937199 - 2939886 | 102510.0 |
| hypothetical protein | PLIM_RS11730 | Not Available | Positive | 2939977 - 2940252 | 10008.2 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
