Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | PLIM_RS10735 | Q7ULP3 | Negative | 2698432 - 2699094 | 23774.6 |
| hypothetical protein | PLIM_RS10740 | Not Available | Negative | 2699401 - 2702199 | 94815.8 |
| pp2c family protein-serine/threonine phosphatase | PLIM_RS22810 | Not Available | Positive | 2702713 - 2704383 | 59923.1 |
| sigma-54 dependent transcriptional regulator | PLIM_RS10750 | Q9APD9 | Negative | 2704463 - 2705854 | 51138.9 |
| pas domain-containing sensor histidine kinase | PLIM_RS10755 | O31661 | Negative | 2706002 - 2707534 | 56153.2 |
| protein phosphatase 2c domain-containing protein | PLIM_RS22815 | Q5XAP6 | Negative | 2707836 - 2709173 | 49071.0 |
| duf6268 family outer membrane beta-barrel protein | PLIM_RS22820 | Not Available | Positive | 2709615 - 2710853 | 44938.1 |
| duf1501 domain-containing protein | PLIM_RS10775 | Not Available | Negative | 2710862 - 2712208 | 48470.9 |
| duf1553 domain-containing protein | PLIM_RS10780 | Not Available | Negative | 2712301 - 2715837 | 131830.0 |
| hypothetical protein | PLIM_RS22825 | Not Available | Negative | 2716104 - 2716601 | 17380.0 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
