Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citramalate synthase | PLIM_RS10685 | Q74C76 | Negative | 2684576 - 2686144 | 57563.7 |
| adenylosuccinate synthase | PLIM_RS10690 | Q8R6T8 | Positive | 2686745 - 2688025 | 46011.1 |
| deda family protein | PLIM_RS10695 | P0ABP7 | Positive | 2688082 - 2688777 | 25263.2 |
| fad-dependent oxidoreductase | PLIM_RS10700 | Not Available | Negative | 2689046 - 2691166 | 78025.3 |
| helix-turn-helix domain-containing protein | PLIM_RS10705 | P77626 | Negative | 2691268 - 2691858 | 21788.9 |
| l-threonine 3-dehydrogenase | PLIM_RS10710 | Q02BT1 | Positive | 2692065 - 2693093 | 37510.6 |
| glycine c-acetyltransferase | PLIM_RS10715 | P0AB78 | Positive | 2693210 - 2694394 | 42568.9 |
| m60 family metallopeptidase | PLIM_RS10720 | Q5XHI4 | Positive | 2694469 - 2696826 | 87163.1 |
| trimeric intracellular cation channel family protein | PLIM_RS10725 | P0AFP1 | Positive | 2696855 - 2697511 | 23672.5 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | PLIM_RS10730 | A1U5H6 | Negative | 2697527 - 2698264 | 26275.7 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
