Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdgsh iron-sulfur domain-containing protein | PLIM_RS10270 | Not Available | Positive | 2579584 - 2579856 | 9843.69 |
| alpha/beta hydrolase-fold protein | PLIM_RS10275 | Not Available | Positive | 2579923 - 2582025 | 79367.9 |
| menaquinone biosynthesis family protein | PLIM_RS10280 | Q5SI12 | Negative | 2582410 - 2583294 | 32871.8 |
| globin | PLIM_RS10285 | Not Available | Positive | 2583507 - 2583935 | 16015.3 |
| gtpase | PLIM_RS22775 | Q24M98 | Negative | 2584000 - 2585235 | 45117.0 |
| exodeoxyribonuclease vii small subunit | PLIM_RS23670 | Q60AM9 | Negative | 2585342 - 2585809 | 16968.6 |
| metal abc transporter permease | PLIM_RS10300 | Q9PKX0 | Negative | 2585919 - 2587295 | 49393.4 |
| iron chelate uptake abc transporter family permease subunit | PLIM_RS22780 | Q9KD29 | Negative | 2587346 - 2588770 | 50957.3 |
| metal abc transporter atp-binding protein | PLIM_RS10310 | P96117 | Negative | 2588863 - 2589651 | 28482.3 |
| metal abc transporter solute-binding protein, zn/mn family | PLIM_RS10315 | O34385 | Negative | 2589654 - 2590706 | 38271.9 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
