Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-glutamate o-methyltransferase cher | PLIM_RS09910 | O87131 | Positive | 2494077 - 2494913 | 31762.2 |
| response regulator | PLIM_RS09920 | Not Available | Positive | 2495396 - 2497096 | 63035.8 |
| hypothetical protein | PLIM_RS09925 | Not Available | Negative | 2497243 - 2498769 | 55499.3 |
| hypothetical protein | PLIM_RS24380 | Not Available | Positive | 2498901 - 2499059 | 5546.48 |
| sigma-54 dependent transcriptional regulator | PLIM_RS09930 | Q8Z333 | Negative | 2499143 - 2500546 | 51862.3 |
| type ii secretion system f family protein | PLIM_RS09935 | Not Available | Negative | 2500865 - 2501803 | 34057.5 |
| type ii secretion system f family protein | PLIM_RS09940 | Not Available | Negative | 2501908 - 2502873 | 34905.6 |
| cpaf family protein | PLIM_RS09945 | Not Available | Negative | 2503019 - 2504347 | 49020.6 |
| alpha-amylase/4-alpha-glucanotransferase domain-containing protein | PLIM_RS09950 | P09961 | Negative | 2504703 - 2506913 | 83202.4 |
| molybdenum cofactor guanylyltransferase | PLIM_RS09955 | Not Available | Negative | 2507056 - 2507745 | 25073.3 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
