Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | DSM 3776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | PLIM_RS08475 | Q69PS6 | Positive | 2110770 - 2111819 | 37649.6 |
| xaa-pro peptidase family protein | PLIM_RS08480 | Q2FG30 | Positive | 2111913 - 2113094 | 43313.7 |
| nad-dependent epimerase/dehydratase family protein | PLIM_RS08485 | Q8EG63 | Positive | 2113142 - 2114161 | 37212.8 |
| thioredoxin family protein | PLIM_RS08490 | Not Available | Positive | 2114420 - 2114950 | 19244.3 |
| hypothetical protein | PLIM_RS08495 | Not Available | Positive | 2115210 - 2115548 | 12745.1 |
| phytanoyl-coa dioxygenase family protein | PLIM_RS08500 | O62515 | Negative | 2115570 - 2116391 | 31101.8 |
| sigma-54 dependent transcriptional regulator | PLIM_RS08505 | Not Available | Negative | 2116497 - 2117918 | 52458.2 |
| hypothetical protein | PLIM_RS08515 | Not Available | Positive | 2118198 - 2119535 | 49242.1 |
| hypothetical protein | PLIM_RS08520 | Not Available | Positive | 2119817 - 2121310 | 55791.9 |
| tim barrel protein | PLIM_RS08525 | Q5T013 | Negative | 2121397 - 2122329 | 33951.6 |
Pathways
481 pathways
Health Effects
No health effects information available for this bacterium.
