Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | PLIM_RS23800 | Not Available | + | 2648 - 2950 | 11244.4 |
| Terminase small subunit | PLIM_RS25120 | Not Available | + | 3169 - 3564 | 14071.5 |
| Terminase large subunit | PLIM_RS21815 | P59217 | + | 3521 - 5182 | 62937.7 |
| Portal protein | PLIM_RS23470 | Q9ZXB2 | + | 5179 - 6813 | 60421.6 |
| Putative clp protease | PLIM_RS21830 | Q4FM94 | + | 6743 - 7429 | 25202.0 |
| Capsid | PLIM_RS23475 | Not Available | + | 7597 - 8910 | 48039.3 |
| hypothetical protein | PLIM_RS21840 | Not Available | + | 9043 - 9348 | 10658.3 |
| Dna packaging/head-tail-connector | PLIM_RS21845 | Not Available | + | 9395 - 9982 | 22146.2 |
| phage head closure protein | PLIM_RS21850 | Not Available | + | 9982 - 10317 | 12498.8 |
| hypothetical protein | PLIM_RS21855 | Not Available | + | 10314 - 10949 | 22825.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.