Kosmotoga olearia TBF 19.5.1

Gram-negativeRodMotileanaerobic

Kingdom

Thermotogati

Phylum

Thermotogota

Class

Thermotogae

Order

Kosmotogales

Family

Kosmotogaceae

Genus

Kosmotoga

Description

Kosmotoga olearia (strain TBF 19.5.1) is a Gram-negative bacterium isolated from an oil deposit and has a broad temperature growth range, so it is useful for comparative structural biology of thermophilic and mesophilic proteins as well as learning about oil deposit ecosystems. It has the characteristic morphology of one or more cells contained in a sheath-like envelope which extends beyond the cell wall. (EBI Integr8)

Taxonomy

KingdomThermotogati
PhylumThermotogota
ClassThermotogae
OrderKosmotogales
FamilyKosmotogaceae
GenusKosmotoga
SpeciesKosmotoga olearia
StrainTBF 19.5.1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Kosmotoga olearia TBF 19.5.1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature45
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNo

Genome Summary

Kosmotoga olearia TBF 19.5.1, complete sequence.

Gene Summary

Adenine Count

666146 bp

Thymine Count

679539 bp

Guanine Count

480879 bp

Cytosine Count

475562 bp

Genome Length

2302126 bp

Protein-coding Genes

2131 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-thrNot AvailableNot AvailablePositive1737890 - 1737966Not Available
aminomethyl-transferring glycine dehydrogenase subunit gcvpbKOLE_RS08170Not AvailableNegative1738023 - 173947453760.1
aminomethyl-transferring glycine dehydrogenase subunit gcvpaKOLE_RS08175Not AvailableNegative1739471 - 174082050255.6
glycine cleavage system protein gcvhKOLE_RS08180Not AvailableNegative1740822 - 174119313816.1
glycine cleavage system aminomethyltransferase gcvtKOLE_RS08185Not AvailableNegative1741213 - 174231941475.0
putative signal transducing proteinKOLE_RS08190Not AvailableNegative1742323 - 17425418260.04
6-phosphofructokinaseKOLE_RS08195Not AvailablePositive1742693 - 174365534583.3
pyruvate kinaseKOLE_RS08200Not AvailablePositive1743675 - 174509351973.3
co-chaperone groesKOLE_RS08205Not AvailablePositive1745333 - 174560210039.2
chaperonin groelKOLE_RS08210Not AvailablePositive1745618 - 174723757818.9

Displaying genes 1621 – 1630 of 2186 in total

Metabolites

788 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 788 metabolites

Health Effects

No health effects information available for this bacterium.