Kosmotoga olearia TBF 19.5.1

Gram-negativeRodMotileanaerobic

Kingdom

Thermotogati

Phylum

Thermotogota

Class

Thermotogae

Order

Kosmotogales

Family

Kosmotogaceae

Genus

Kosmotoga

Description

Kosmotoga olearia (strain TBF 19.5.1) is a Gram-negative bacterium isolated from an oil deposit and has a broad temperature growth range, so it is useful for comparative structural biology of thermophilic and mesophilic proteins as well as learning about oil deposit ecosystems. It has the characteristic morphology of one or more cells contained in a sheath-like envelope which extends beyond the cell wall. (EBI Integr8)

Taxonomy

Kingdom	Thermotogati
Phylum	Thermotogota
Class	Thermotogae
Order	Kosmotogales
Family	Kosmotogaceae
Genus	Kosmotoga
Species	Kosmotoga olearia
Strain	TBF 19.5.1

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	Yes
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	anaerobic
Optimal temperature	45
Temperature range	Mesophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	non-spore-forming
Energy source	Not Available
Pathogenicity	No

Genome Summary

Kosmotoga olearia TBF 19.5.1, complete sequence.

NC_012785.1

Gene Summary

Adenine Count

666146 bp

Thymine Count

679539 bp

Guanine Count

480879 bp

Cytosine Count

475562 bp

Genome Length

2302126 bp

Protein-coding Genes

2131 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
5-deoxy-glucuronate isomerase	KOLE_RS04995	Not Available	Negative	1046049 - 1046852	30699.5
tartrate dehydrogenase	KOLE_RS05000	Not Available	Negative	1046869 - 1047936	39264.5
transketolase family protein	KOLE_RS05005	Not Available	Negative	1047936 - 1048913	35940.1
transketolase	KOLE_RS05010	Not Available	Negative	1048910 - 1049764	31709.1
nickel-dependent lactate racemase	KOLE_RS05015	Not Available	Negative	1049768 - 1051033	46249.3
phosphoglycerate kinase	KOLE_RS05020	Not Available	Negative	1051030 - 1052295	46707.6
type ii glyceraldehyde-3-phosphate dehydrogenase	KOLE_RS05025	Not Available	Negative	1052301 - 1053317	37177.4
laci family dna-binding transcriptional regulator	KOLE_RS05030	Not Available	Negative	1053334 - 1054317	37340.9
Trna-pro	Not Available	Not Available	Positive	1055035 - 1055110	Not Available
hesa/moeb/thif family protein	KOLE_RS05045	Not Available	Positive	1055252 - 1056352	41980.7

Displaying genes 991 – 1000 of 2186 in total

Pathways

537 pathways

Lysine Biosynthesis

Glycolysis and Pyruvate Dehydrogenase

Ornithine Metabolism

Palmitate Biosynthesis

tRNA Charging

Glycine Biosynthesis

Gluconeogenesis from L-Malic Acid

Mannose Metabolism

Show All 537 Pathways

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000217	alpha-ribazoleC14H18N2O4	Not available	Average278.3037Da Monoisotopic278.126657074Da
BASm0000237	(R)-4'-phosphopantothenateC9H18NO8P	Not available	Average299.2149Da Monoisotopic299.0770031Da
BASm0000251	2-dehydropantoateC6H9O4	Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000260	3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5	Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6	Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0000428	3-oxoadipateC6H6O5	Not available	Average158.11Da Monoisotopic158.022620453Da
BASm0000592	(S)-1-phenylethanolC8H10O	Not available	Average122.1644Da Monoisotopic122.0731649Da
BASm0000989	GlycerolC3H8O3	`56-81-5`	Average92.0938Da Monoisotopic92.04734412Da
BASm0001225	dodecanoateC12H23O2	Not available	Average199.3098Da Monoisotopic199.169805Da
BASm0001639	CobinamideC48H72CoN11O8	`13497-85-3`	Average990.0874Da Monoisotopic989.4897335Da

Displaying 1–10 of 788 metabolites

Health Effects

No health effects information available for this bacterium.