Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol phosphate aminotransferase apoenzyme | SAMN05421849_0888 | Not Available | Negative | 897617 - 898714 | 38933.3 |
| molecular chaperone ibpa | SAMN05421849_0889 | Not Available | Negative | 898951 - 899406 | 16833.9 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN05421849_0890 | Not Available | Negative | 899598 - 900068 | 16788.5 |
| ribosome-associated protein | SAMN05421849_0891 | Not Available | Negative | 900078 - 900554 | 17634.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421849_0892 | Not Available | Positive | 900704 - 901927 | 44542.2 |
| 3-isopropylmalate dehydratase, large subunit | SAMN05421849_0893 | Not Available | Positive | 902210 - 903625 | 50872.4 |
| uncharacterized membrane protein hded, duf308 family | SAMN05421849_0894 | Not Available | Positive | 903691 - 904218 | 18616.9 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN05421849_0895 | Not Available | Positive | 904268 - 904873 | 22659.2 |
| endonuclease/exonuclease/phosphatase family protein | SAMN05421849_0896 | Not Available | Positive | 904911 - 906041 | 39749.2 |
| 3-isopropylmalate dehydrogenase | SAMN05421849_0897 | Not Available | Positive | 906076 - 907182 | 39750.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
