Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna um-2552 2'-o-methyltransferase | SAMN05421849_0878 | Not Available | Positive | 884743 - 885477 | 26475.6 |
| predicted purr-regulated permease perm | SAMN05421849_0879 | Not Available | Positive | 885673 - 886845 | 42029.5 |
| cardiolipin synthase | SAMN05421849_0880 | Not Available | Positive | 886887 - 888299 | 53130.9 |
| hypothetical protein | SAMN05421849_0881 | Not Available | Negative | 888285 - 888641 | 12406.6 |
| putative abc transport system atp-binding protein | SAMN05421849_0882 | Not Available | Positive | 888792 - 889448 | 23327.1 |
| putative abc transport system permease protein | SAMN05421849_0883 | Not Available | Positive | 889445 - 891853 | 85785.3 |
| predicted secreted hydrolase | SAMN05421849_0884 | Not Available | Positive | 891843 - 892895 | 37955.3 |
| imp dehydrogenase | SAMN05421849_0885 | Not Available | Negative | 892902 - 894350 | 50753.9 |
| uncharacterized 2fe-2 and 4fe-4s clusters-containing protein, contains duf4445 domain | SAMN05421849_0886 | Not Available | Positive | 894645 - 896693 | 73073.6 |
| prephenate dehydrogenase | SAMN05421849_0887 | Not Available | Negative | 896697 - 897620 | 32798.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
