Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hnh endonuclease | SAMN05421849_1570 | Not Available | Positive | 1582878 - 1583225 | 13001.6 |
| Major capsid protein | SAMN05421849_1571 | Not Available | Positive | 1583218 - 1584453 | 43274.9 |
| Prohead protease | SAMN05421849_1572 | Not Available | Positive | 1584453 - 1585007 | 20017.6 |
| phage portal protein | SAMN05421849_1573 | Not Available | Positive | 1585004 - 1586071 | 37772.1 |
| hypothetical protein | SAMN05421849_1574 | Not Available | Negative | 1586314 - 1586874 | 21085.0 |
| hypothetical protein | SAMN05421849_1575 | Not Available | Positive | 1587165 - 1587353 | 6860.19 |
| hypothetical protein | SAMN05421849_1576 | Not Available | Positive | 1587350 - 1587697 | 13031.3 |
| hypothetical protein | SAMN05421849_1577 | Not Available | Positive | 1587770 - 1588219 | 16688.1 |
| hypothetical protein | SAMN05421849_1578 | Not Available | Positive | 1588224 - 1588493 | 9891.08 |
| Attr | Not Available | Not Available | Positive | 1588390 - 1588401 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
