Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligoendopeptidase f | SAMN05421849_0717 | Not Available | Positive | 722097 - 723917 | 68407.9 |
| hypothetical protein | SAMN05421849_0718 | Not Available | Positive | 723992 - 724168 | 6617.71 |
| transcriptional regulator, trar/dksa family | SAMN05421849_0719 | Not Available | Negative | 724283 - 724555 | 10157.9 |
| rna polymerase, sigma 32 subunit, rpoh | SAMN05421849_0720 | Not Available | Negative | 724699 - 725595 | 34114.8 |
| ribosomal large subunit pseudouridine synthase d | SAMN05421849_0721 | Not Available | Negative | 725780 - 726811 | 36755.5 |
| hypothetical protein | SAMN05421849_0722 | Not Available | Positive | 726891 - 727112 | 7651.4 |
| Trna-his | Not Available | Not Available | Positive | 727169 - 727245 | Not Available |
| hypothetical protein | SAMN05421849_0724 | Not Available | Positive | 727357 - 727551 | 7033.3 |
| two component transcriptional regulator, luxr family | SAMN05421849_0726 | Not Available | Negative | 727950 - 728678 | 26347.1 |
| two-component system, narl family, sensor histidine kinase uhpb | SAMN05421849_0727 | Not Available | Negative | 728660 - 730138 | 53424.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
