Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN05421849_0226 | Not Available | Negative | 213312 - 214088 | 28553.9 |
| Attr | Not Available | Not Available | Positive | 214413 - 214424 | Not Available |
| Integrase | SAMN05421849_0227 | Not Available | Positive | 214672 - 215871 | 44221.7 |
| Attl | Not Available | Not Available | Positive | 1566620 - 1566631 | Not Available |
| Putative peptidoglycan o-acetyltransferase | SAMN05421849_1564 | Not Available | Negative | 1577105 - 1579159 | 74473.1 |
| hypothetical protein | SAMN05421849_1565 | Not Available | Positive | 1579562 - 1579930 | 12712.2 |
| Hypothetical protein | SAMN05421849_1566 | Not Available | Positive | 1579927 - 1580457 | 19418.2 |
| hypothetical protein | SAMN05421849_1567 | Not Available | Positive | 1580454 - 1580687 | 9006.23 |
| hypothetical protein | SAMN05421849_1568 | Not Available | Positive | 1581038 - 1581265 | 8762.45 |
| Portal protein | SAMN05421849_1569 | Not Available | Positive | 1581262 - 1582887 | 57956.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
