Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase ycbb/ykud | SAMN05421849_0607 | Not Available | Negative | 597949 - 599571 | 59578.3 |
| uncharacterized conserved protein ycbk, duf882 family | SAMN05421849_0608 | Not Available | Positive | 599910 - 600479 | 20754.8 |
| betaine aldehyde dehydrogenase | SAMN05421849_0609 | Not Available | Negative | 600579 - 602036 | 51664.6 |
| glycine betaine/proline transport system substrate-binding protein | SAMN05421849_0610 | Not Available | Positive | 602256 - 603173 | 32588.2 |
| glycine betaine/proline transport system permease protein | SAMN05421849_0611 | Not Available | Positive | 603316 - 604149 | 30012.2 |
| glycine betaine/proline transport system atp-binding protein | SAMN05421849_0612 | Not Available | Positive | 604146 - 605189 | 37953.2 |
| methyltransferase domain-containing protein | SAMN05421849_0613 | Not Available | Negative | 605238 - 605879 | 22835.0 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421849_0614 | Not Available | Positive | 605987 - 606850 | 30647.8 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05421849_0615 | Not Available | Negative | 606858 - 608783 | 67358.8 |
| farnesyl-diphosphate synthase | SAMN05421849_0616 | Not Available | Negative | 608812 - 609741 | 31311.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
