Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | SAMN05421849_0587 | Not Available | Negative | 577627 - 578190 | 21056.2 |
| uridylate kinase | SAMN05421849_0588 | Not Available | Negative | 578244 - 578990 | 27137.9 |
| trna dimethylallyltransferase | SAMN05421849_0589 | Not Available | Positive | 579112 - 580005 | 32618.1 |
| transcriptional regulator, arac family | SAMN05421849_0590 | Not Available | Positive | 580061 - 580900 | 29930.9 |
| peptide/nickel transport system substrate-binding protein | SAMN05421849_0591 | Not Available | Positive | 581028 - 582680 | 60620.1 |
| transglycosylase slt domain-containing protein | SAMN05421849_0592 | Not Available | Negative | 582817 - 583401 | 20977.0 |
| single-strand binding protein | SAMN05421849_0593 | Not Available | Positive | 583638 - 584132 | 17732.3 |
| stage iv sporulation protein fb | SAMN05421849_0594 | Not Available | Positive | 584211 - 585290 | 39238.1 |
| 3-dehydroquinate synthase | SAMN05421849_0595 | Not Available | Negative | 585331 - 586446 | 39214.5 |
| shikimate kinase | SAMN05421849_0596 | Not Available | Negative | 586460 - 587077 | 22307.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
