Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421849_0496 | Not Available | Positive | 479368 - 480033 | 23394.0 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN05421849_0497 | Not Available | Positive | 480177 - 480959 | 27550.8 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05421849_0498 | Not Available | Positive | 480956 - 481618 | 24002.1 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05421849_0499 | Not Available | Positive | 481683 - 482840 | 39614.4 |
| hypothetical protein | SAMN05421849_0500 | Not Available | Negative | 482864 - 483757 | 32672.0 |
| sec-independent protein translocase protein tatc | SAMN05421849_0501 | Not Available | Negative | 483699 - 484733 | 37197.6 |
| sec-independent protein translocase protein tatb | SAMN05421849_0502 | Not Available | Negative | 484711 - 485217 | 17484.6 |
| sec-independent protein translocase protein tata | SAMN05421849_0503 | Not Available | Negative | 485224 - 485442 | 7625.33 |
| hth domain-containing protein | SAMN05421849_0504 | Not Available | Positive | 485596 - 486297 | 25584.2 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421849_0505 | Not Available | Negative | 486334 - 487113 | 26256.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
