Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium/proton antiporter, cpa1 family | SAMN05421849_0466 | Not Available | Negative | 447711 - 449582 | 66944.9 |
| dgtpase | SAMN05421849_0467 | Not Available | Negative | 449633 - 450811 | 43615.9 |
| iron-sulfur cluster assembly accessory protein | SAMN05421849_0468 | Not Available | Positive | 450911 - 451234 | 11400.4 |
| hypothetical protein | SAMN05421849_0469 | Not Available | Negative | 451264 - 452343 | 39678.8 |
| exodeoxyribonuclease-3 | SAMN05421849_0470 | Not Available | Positive | 452576 - 453364 | 29490.9 |
| atp-dependent proteinase. serine peptidase. merops family s16 | SAMN05421849_0471 | Not Available | Negative | 453492 - 455906 | 88629.7 |
| pp_00450 | SAMN05421849_0472 | Not Available | Negative | 456171 - 457301 | Not Available |
| fes assembly suf system protein | SAMN05421849_0473 | Not Available | Positive | 457576 - 457938 | 13090.7 |
| hypothetical protein | SAMN05421849_0474 | Not Available | Positive | 458105 - 458773 | 23240.9 |
| protein of unknown function | SAMN05421849_0475 | Not Available | Positive | 458902 - 459615 | 25334.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
