Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fdhd protein | SAMN05421849_0396 | Not Available | Negative | 377495 - 378310 | 28575.2 |
| formate dehydrogenase alpha subunit | SAMN05421849_0397 | Not Available | Negative | 378315 - 381209 | 105673.0 |
| formate dehydrogenase beta subunit | SAMN05421849_0398 | Not Available | Negative | 381206 - 382726 | 53525.4 |
| formate dehydrogenase gamma subunit | SAMN05421849_0399 | Not Available | Negative | 382726 - 383193 | 17111.4 |
| transcriptional regulator, mode family | SAMN05421849_0400 | Not Available | Positive | 383443 - 384234 | 27349.2 |
| cyanate permease | SAMN05421849_0401 | Not Available | Negative | 384257 - 385447 | 41976.9 |
| long-chain fatty acid transport protein | SAMN05421849_0402 | Not Available | Positive | 385865 - 386989 | 40233.3 |
| hypothetical protein | SAMN05421849_0403 | Not Available | Positive | 387065 - 387946 | 33136.1 |
| transcriptional regulator, tetr family | SAMN05421849_0404 | Not Available | Negative | 387970 - 388602 | 22722.1 |
| homoserine o-succinyltransferase | SAMN05421849_0405 | Not Available | Negative | 388731 - 389648 | 34887.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
