Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05421849_0286 | Not Available | Positive | 265331 - 266545 | 41820.3 |
| phytoene/squalene synthetase | SAMN05421849_0287 | Not Available | Negative | 266638 - 267417 | 28313.1 |
| 2-isopropylmalate synthase | SAMN05421849_0288 | Not Available | Negative | 267404 - 269125 | 61283.6 |
| cysteinyl-trna synthetase | SAMN05421849_0289 | Not Available | Negative | 269122 - 270591 | 53413.6 |
| opacity protein | SAMN05421849_0290 | Not Available | Negative | 270757 - 271278 | 18313.6 |
| ef hand | SAMN05421849_0291 | Not Available | Negative | 271500 - 271808 | 10182.4 |
| zinc transport system permease protein | SAMN05421849_0292 | Not Available | Negative | 272164 - 272982 | 27931.3 |
| zinc transport system atp-binding protein | SAMN05421849_0293 | Not Available | Negative | 272979 - 273761 | 27687.2 |
| fur family transcriptional regulator, zinc uptake regulator | SAMN05421849_0294 | Not Available | Negative | 273758 - 274255 | 17894.4 |
| zinc transport system substrate-binding protein | SAMN05421849_0295 | Not Available | Positive | 274345 - 275337 | 34728.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
