Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 227707 - 227781 | Not Available |
| hypothetical protein | SAMN05421849_0246 | Not Available | Negative | 227853 - 228059 | 7583.79 |
| ribonuclease, rne/rng family | SAMN05421849_0247 | Not Available | Negative | 228073 - 229092 | 35403.6 |
| septum formation protein | SAMN05421849_0248 | Not Available | Negative | 229089 - 229667 | 20443.0 |
| bacterial translation initiation factor 1 (bif-1) | SAMN05421849_0249 | Not Available | Negative | 229736 - 229954 | 8314.16 |
| protein-tyrosine-phosphatase | SAMN05421849_0250 | Not Available | Negative | 230084 - 230569 | 18097.6 |
| uncharacterized protein, upf0262 family | SAMN05421849_0251 | Not Available | Negative | 230570 - 231049 | 18006.6 |
| histidinol dehydrogenase | SAMN05421849_0252 | Not Available | Negative | 231056 - 232357 | 46347.2 |
| protein of unknown function | SAMN05421849_0253 | Not Available | Negative | 232613 - 233098 | 18106.3 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN05421849_0254 | Not Available | Negative | 233105 - 234370 | 44111.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
