Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMN05421849_2556 | Not Available | Negative | 2603885 - 2605510 | 60328.4 |
| transposase | SAMN05421849_2557 | Not Available | Negative | 2605571 - 2605921 | 12782.6 |
| udp-galactopyranose mutase | SAMN05421849_2558 | Not Available | Positive | 2606671 - 2607825 | 44132.2 |
| mannose-1-phosphate guanylyltransferase/mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase | SAMN05421849_2559 | Not Available | Positive | 2607971 - 2609392 | 51187.0 |
| hypothetical protein | SAMN05421849_2560 | Not Available | Negative | 2609449 - 2609736 | 10819.2 |
| dimethylamine/trimethylamine dehydrogenase | SAMN05421849_2561 | Not Available | Positive | 2609894 - 2612107 | 82471.3 |
| aminomethyltransferase | SAMN05421849_2562 | Not Available | Positive | 2612327 - 2613421 | 40006.0 |
| trimethylamine dehydrogenase apoprotein | SAMN05421849_2563 | Not Available | Positive | 2613583 - 2615781 | 82583.3 |
| fe-s oxidoreductase | SAMN05421849_2564 | Not Available | Positive | 2615907 - 2618060 | 80792.6 |
| leucine rich repeat variant | SAMN05421849_2565 | Not Available | Positive | 2618057 - 2619466 | 50319.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
