Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h dehydrogenase (quinone) | SAMN05421849_2520 | Not Available | Positive | 2571597 - 2572187 | 20604.2 |
| short-chain dehydrogenase | SAMN05421849_2521 | Not Available | Positive | 2572280 - 2572981 | 24629.7 |
| catalase | SAMN05421849_2522 | Not Available | Positive | 2573141 - 2574640 | 56102.5 |
| atp-dependent rna helicase rhle | SAMN05421849_2523 | Not Available | Positive | 2574982 - 2576409 | 50819.6 |
| regulatory protein, luxr family | SAMN05421849_2524 | Not Available | Negative | 2576446 - 2577492 | 36647.3 |
| pas domain s-box-containing protein | SAMN05421849_2525 | Not Available | Negative | 2577554 - 2579380 | 65607.8 |
| hypothetical protein | SAMN05421849_2526 | Not Available | Negative | 2579377 - 2579850 | 17521.9 |
| hypothetical protein | SAMN05421849_2527 | Not Available | Positive | 2580032 - 2580394 | 13213.9 |
| hypothetical protein | SAMN05421849_2528 | Not Available | Positive | 2580430 - 2581410 | 35052.7 |
| ca-activated chloride channel family protein | SAMN05421849_2529 | Not Available | Positive | 2581446 - 2583212 | 61880.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
