Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rubrerythrin | SAMN05421849_2460 | Not Available | Negative | 2514782 - 2515756 | 35418.4 |
| ost-hth/lotus domain-containing protein | SAMN05421849_2461 | Not Available | Negative | 2515855 - 2516565 | 26102.8 |
| s-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase | SAMN05421849_2462 | Not Available | Negative | 2516566 - 2517693 | 39968.3 |
| [lsu ribosomal protein l11p]-lysine n-methyltransferase | SAMN05421849_2463 | Not Available | Positive | 2517862 - 2518743 | 30332.4 |
| protein of unknown function | SAMN05421849_2464 | Not Available | Negative | 2518870 - 2519088 | 7714.21 |
| holliday junction endonuclease ruvc | SAMN05421849_2465 | Not Available | Positive | 2519424 - 2519921 | 17560.3 |
| holliday junction dna helicase subunit ruva | SAMN05421849_2466 | Not Available | Positive | 2519918 - 2520598 | 22840.5 |
| holliday junction dna helicase subunit ruvb | SAMN05421849_2467 | Not Available | Positive | 2520621 - 2521676 | 38368.1 |
| hypothetical protein | SAMN05421849_2468 | Not Available | Negative | 2521856 - 2522581 | 24769.0 |
| ribulose-phosphate 3-epimerase | SAMN05421849_2469 | Not Available | Negative | 2522967 - 2523656 | 23590.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
