Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular polysaccharide transport system permease protein | SAMN05421849_2450 | Not Available | Positive | 2506389 - 2507819 | 52700.8 |
| capsular polysaccharide transport system atp-binding protein | SAMN05421849_2451 | Not Available | Positive | 2507883 - 2508536 | 24555.6 |
| putative transposase | SAMN05421849_2452 | Not Available | Positive | 2508688 - 2508764 | 2819.41 |
| udp-glucose 4-epimerase | SAMN05421849_2453 | Not Available | Negative | 2508765 - 2508931 | 5947.11 |
| utp--glucose-1-phosphate uridylyltransferase | SAMN05421849_2454 | Not Available | Negative | 2508953 - 2509846 | 32494.1 |
| glycosyltransferase, gt2 family | SAMN05421849_2455 | Not Available | Negative | 2509982 - 2511274 | 46516.8 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN05421849_2456 | Not Available | Negative | 2511271 - 2512074 | 29202.8 |
| 3'(2'),5'-bisphosphate nucleotidase | SAMN05421849_2457 | Not Available | Negative | 2512074 - 2512871 | 28884.8 |
| abc-type polysaccharide/polyol phosphate export permease | SAMN05421849_2458 | Not Available | Positive | 2513012 - 2513833 | 30342.9 |
| s-formylglutathione hydrolase | SAMN05421849_2459 | Not Available | Negative | 2513876 - 2514706 | 30702.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
