Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(arg) a34 adenosine deaminase tada | SAMN05421849_2440 | Not Available | Negative | 2496097 - 2496594 | 17056.2 |
| glucose-1-phosphate thymidylyltransferase | SAMN05421849_2441 | Not Available | Negative | 2496654 - 2497520 | 31123.6 |
| dtdp-4-dehydrorhamnose reductase | SAMN05421849_2442 | Not Available | Negative | 2497517 - 2498368 | 29538.1 |
| dtdp-glucose 4,6-dehydratase | SAMN05421849_2443 | Not Available | Negative | 2498471 - 2499511 | 38252.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05421849_2444 | Not Available | Negative | 2499502 - 2500149 | 23278.2 |
| plasmid replication initiator protein | SAMN05421849_2445 | Not Available | Negative | 2500203 - 2501213 | 37649.5 |
| chromosome partitioning protein | SAMN05421849_2446 | Not Available | Positive | 2501661 - 2503061 | 51022.4 |
| chromosome segregation protein spo0j, contains parb-like nuclease domain | SAMN05421849_2447 | Not Available | Positive | 2503064 - 2504209 | 40842.6 |
| glycosyltransferase, gt2 family | SAMN05421849_2448 | Not Available | Positive | 2504336 - 2505358 | 37723.1 |
| capsular polysaccharide transport system permease protein | SAMN05421849_2449 | Not Available | Negative | 2505398 - 2506192 | 29493.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
