Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna end-binding protein ku | SAMN05421849_2357 | Not Available | Positive | 2398828 - 2399628 | 30409.2 |
| atp-dependent dna ligase ligd phosphoesterase module /atp-dependent dna ligase ligd polymerase module | SAMN05421849_2358 | Not Available | Negative | 2399650 - 2402112 | 89565.7 |
| maltooligosyl trehalose synthase | SAMN05421849_2359 | Not Available | Negative | 2402226 - 2404562 | 84727.7 |
| starch synthase | SAMN05421849_2360 | Not Available | Positive | 2404725 - 2406176 | 51189.7 |
| 4-alpha-glucanotransferase | SAMN05421849_2361 | Not Available | Negative | 2406147 - 2407946 | 64772.4 |
| maltooligosyl trehalose hydrolase | SAMN05421849_2362 | Not Available | Negative | 2407943 - 2409694 | 63720.8 |
| glycogen operon protein | SAMN05421849_2363 | Not Available | Negative | 2409691 - 2411772 | 78071.6 |
| 1,4-alpha-glucan branching enzyme | SAMN05421849_2364 | Not Available | Negative | 2411765 - 2413981 | 82852.0 |
| maltose alpha-d-glucosyltransferase/ alpha-amylase | SAMN05421849_2365 | Not Available | Negative | 2413978 - 2415495 | 54216.0 |
| alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase | SAMN05421849_2366 | Not Available | Negative | 2415492 - 2417495 | 75537.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
