Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | SAMN05421849_2287 | Not Available | Positive | 2328699 - 2329313 | 22533.1 |
| arabinose-5-phosphate isomerase | SAMN05421849_2288 | Not Available | Positive | 2329310 - 2330269 | 33157.2 |
| lipopolysaccharide export system protein lptc | SAMN05421849_2289 | Not Available | Positive | 2330288 - 2330884 | 21023.2 |
| lipopolysaccharide export system protein lpta | SAMN05421849_2290 | Not Available | Positive | 2330889 - 2331389 | 17419.8 |
| lipopolysaccharide export system atp-binding protein | SAMN05421849_2291 | Not Available | Positive | 2331389 - 2332147 | 28045.0 |
| ribosomal subunit interface protein | SAMN05421849_2292 | Not Available | Positive | 2332364 - 2332933 | 21008.1 |
| pts iia-like nitrogen-regulatory protein ptsn | SAMN05421849_2293 | Not Available | Positive | 2332990 - 2333451 | 16122.7 |
| hypothetical protein | SAMN05421849_2294 | Not Available | Negative | 2333492 - 2334922 | 53374.5 |
| core-2/i-branching enzyme | SAMN05421849_2295 | Not Available | Negative | 2334922 - 2336625 | 63921.3 |
| glycosyl transferase family 2 | SAMN05421849_2296 | Not Available | Negative | 2336622 - 2337626 | 38821.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
