Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase e | SAMN05421849_2147 | Not Available | Positive | 2189591 - 2192245 | 95153.7 |
| trna 2-thiouridine synthesizing protein a | SAMN05421849_2148 | Not Available | Negative | 2192353 - 2192586 | 8129.9 |
| cytochrome c-type biogenesis protein | SAMN05421849_2149 | Not Available | Positive | 2192707 - 2193459 | 26707.4 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN05421849_2150 | Not Available | Negative | 2193599 - 2194399 | 29548.3 |
| tatd dnase family protein | SAMN05421849_2151 | Not Available | Negative | 2194396 - 2195214 | 29784.2 |
| dna polymerase iii, delta prime subunit | SAMN05421849_2152 | Not Available | Negative | 2195273 - 2196364 | 38506.5 |
| thymidylate kinase | SAMN05421849_2153 | Not Available | Negative | 2196361 - 2197008 | 23416.0 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN05421849_2154 | Not Available | Negative | 2197005 - 2198294 | 45660.0 |
| sporulation related domain-containing protein | SAMN05421849_2155 | Not Available | Negative | 2198313 - 2199110 | 27373.2 |
| hypothetical protein | SAMN05421849_2156 | Not Available | Positive | 2199457 - 2200149 | 24699.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
