Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin synthesis protein biog | SAMN05421849_2127 | Not Available | Positive | 2168998 - 2169621 | 22675.2 |
| malonyl-coa o-methyltransferase | SAMN05421849_2128 | Not Available | Positive | 2169618 - 2170373 | 27201.9 |
| transcriptional regulator, gntr family | SAMN05421849_2129 | Not Available | Negative | 2170370 - 2171038 | 24853.8 |
| crispr-associated helicase, cas3 family | SAMN05421849_2130 | Not Available | Positive | 2171335 - 2173818 | 89783.4 |
| crispr system cascade subunit casa | SAMN05421849_2131 | Not Available | Positive | 2174035 - 2175537 | 55255.6 |
| crispr-associated protein, cse2 family | SAMN05421849_2132 | Not Available | Positive | 2175534 - 2176043 | 18855.4 |
| crispr-associated protein, cse4 family | SAMN05421849_2133 | Not Available | Positive | 2176040 - 2177116 | 38026.8 |
| crispr-associated protein, cas5e family | SAMN05421849_2134 | Not Available | Positive | 2177109 - 2177795 | 24474.4 |
| crispr-associated protein, cse3 family | SAMN05421849_2135 | Not Available | Positive | 2177792 - 2178529 | 26742.2 |
| crispr-associated protein, cas1 family | SAMN05421849_2136 | Not Available | Positive | 2178544 - 2179482 | 33455.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
