Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial peptide chain release factor 1 (brf-1) | SAMN05421849_1955 | Not Available | Positive | 1972380 - 1973453 | 39628.7 |
| release factor glutamine methyltransferase | SAMN05421849_1956 | Not Available | Positive | 1973450 - 1974280 | 29520.5 |
| protein of unknown function | SAMN05421849_1957 | Not Available | Positive | 1974584 - 1975099 | 18996.2 |
| dimethyladenosine transferase | SAMN05421849_1958 | Not Available | Negative | 1975103 - 1975942 | 29856.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05421849_1959 | Not Available | Negative | 1976037 - 1977014 | 34192.6 |
| periplasmic chaperone for outer membrane proteins sura | SAMN05421849_1960 | Not Available | Negative | 1977011 - 1978279 | 46203.2 |
| lps-assembly protein | SAMN05421849_1961 | Not Available | Negative | 1978270 - 1980438 | 80923.5 |
| lipopolysaccharide export system permease protein | SAMN05421849_1962 | Not Available | Negative | 1980438 - 1981541 | 39553.6 |
| lipopolysaccharide export system permease protein | SAMN05421849_1963 | Not Available | Negative | 1981538 - 1982677 | 41941.6 |
| leucyl aminopeptidase | SAMN05421849_1964 | Not Available | Positive | 1982867 - 1984357 | 52255.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
