Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate reductase | SAMN05421849_1890 | Not Available | Positive | 1910951 - 1911760 | 27849.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421849_1891 | Not Available | Negative | 1911878 - 1913206 | 48253.3 |
| protein of unknown function | SAMN05421849_1892 | Not Available | Negative | 1913370 - 1913552 | 6298.35 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN05421849_1893 | Not Available | Positive | 1913701 - 1914975 | 44169.4 |
| uncharacterized conserved protein, heparinase superfamily | SAMN05421849_1894 | Not Available | Positive | 1915145 - 1916791 | 58592.4 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN05421849_1895 | Not Available | Positive | 1916893 - 1918482 | 55417.0 |
| signal peptidase ii aspartic peptidase. merops family a08 | SAMN05421849_1896 | Not Available | Positive | 1918492 - 1918971 | 17245.6 |
| beta-barrel assembly machine subunit bamf | SAMN05421849_1897 | Not Available | Positive | 1919022 - 1919567 | 18988.5 |
| zinc protease | SAMN05421849_1898 | Not Available | Positive | 1919732 - 1921078 | 49405.2 |
| zinc protease | SAMN05421849_1899 | Not Available | Positive | 1921075 - 1922403 | 47836.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
