Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyzozyme m1 (1,4-beta-n-acetylmuramidase), gh25 family | SAMN05421849_1759 | Not Available | Negative | 1778946 - 1780409 | 53344.3 |
| luxr family transcriptional regulator | SAMN05421849_1760 | Not Available | Positive | 1781038 - 1781799 | 28242.0 |
| urease accessory protein ureh | SAMN05421849_1761 | Not Available | Negative | 1781810 - 1782676 | 32460.3 |
| urease accessory protein | SAMN05421849_1762 | Not Available | Negative | 1782676 - 1783290 | 22205.0 |
| urease accessory protein uref | SAMN05421849_1763 | Not Available | Negative | 1783308 - 1784027 | 26351.5 |
| urease accessory protein | SAMN05421849_1764 | Not Available | Negative | 1784024 - 1784605 | 20831.3 |
| urease subunit alpha | SAMN05421849_1765 | Not Available | Negative | 1784610 - 1786322 | 61608.7 |
| urease, beta subunit | SAMN05421849_1766 | Not Available | Negative | 1786374 - 1786883 | 18875.4 |
| urease subunit gamma | SAMN05421849_1767 | Not Available | Negative | 1786902 - 1787213 | 11916.8 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421849_1768 | Not Available | Positive | 1787578 - 1788846 | 46186.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
