Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex transport system atp-binding protein | SAMN05421849_1749 | Not Available | Negative | 1767852 - 1768610 | 26678.6 |
| iron complex transport system permease protein | SAMN05421849_1750 | Not Available | Negative | 1768607 - 1769590 | 33071.1 |
| iron complex transport system substrate-binding protein | SAMN05421849_1751 | Not Available | Negative | 1769587 - 1770447 | 30419.8 |
| vitamin b12 transporter | SAMN05421849_1752 | Not Available | Negative | 1770422 - 1772227 | 65467.8 |
| uncharacterized conserved protein, upf0335 family | SAMN05421849_1753 | Not Available | Positive | 1772690 - 1772950 | 9870.71 |
| nadph2:quinone reductase | SAMN05421849_1754 | Not Available | Negative | 1772961 - 1773950 | 33764.5 |
| sh3-like domain-containing protein | SAMN05421849_1755 | Not Available | Negative | 1774034 - 1774576 | 20136.1 |
| lactate dehydrogenase | SAMN05421849_1756 | Not Available | Positive | 1774695 - 1775681 | 35316.2 |
| 2'-5' rna ligase | SAMN05421849_1757 | Not Available | Positive | 1775720 - 1776280 | 21053.5 |
| dimethylglycine dehydrogenase | SAMN05421849_1758 | Not Available | Positive | 1776402 - 1778891 | 92796.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
