Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421849_1639 | Not Available | Positive | 1652314 - 1653552 | 43303.4 |
| dna polymerase iii, delta subunit | SAMN05421849_1640 | Not Available | Negative | 1653503 - 1654534 | 36218.8 |
| lps-assembly lipoprotein | SAMN05421849_1641 | Not Available | Negative | 1654531 - 1655076 | 19539.1 |
| leucyl-trna synthetase | SAMN05421849_1642 | Not Available | Negative | 1655063 - 1657612 | 93349.9 |
| protein of unknown function | SAMN05421849_1643 | Not Available | Negative | 1657695 - 1658171 | 16542.7 |
| outer membrane protein ompu | SAMN05421849_1644 | Not Available | Positive | 1658660 - 1659724 | 37477.7 |
| hypothetical protein | SAMN05421849_1645 | Not Available | Positive | 1659847 - 1660500 | 23183.8 |
| l,d-transpeptidase catalytic domain | SAMN05421849_1646 | Not Available | Negative | 1660502 - 1661017 | 18572.2 |
| gtp cyclohydrolase ii | SAMN05421849_1647 | Not Available | Negative | 1661026 - 1662123 | 39137.1 |
| two component transcriptional regulator, winged helix family | SAMN05421849_1648 | Not Available | Positive | 1662311 - 1662997 | 25544.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
