Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holin of 3tms, for gene-transfer release | SAMN05421849_0062 | Not Available | Positive | 50741 - 51286 | 19075.2 |
| cytochrome c-type biogenesis protein ccmf | SAMN05421849_0063 | Not Available | Positive | 51359 - 53362 | 73092.3 |
| cytochrome c-type biogenesis protein ccmh | SAMN05421849_0064 | Not Available | Positive | 53359 - 53862 | 18308.9 |
| protein of unknown function | SAMN05421849_0065 | Not Available | Negative | 53915 - 54616 | 26123.1 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN05421849_0066 | Not Available | Negative | 54619 - 55317 | 25325.7 |
| dna repair photolyase | SAMN05421849_0067 | Not Available | Positive | 55536 - 56633 | 40928.4 |
| methyltransferase domain-containing protein | SAMN05421849_0068 | Not Available | Positive | 56657 - 57256 | 22216.2 |
| gmp synthase (glutamine-hydrolysing) | SAMN05421849_0069 | Not Available | Negative | 57270 - 58841 | 57501.9 |
| trimethylamine---corrinoid protein co-methyltransferase | SAMN05421849_0070 | Not Available | Positive | 59038 - 60582 | 55505.1 |
| hypothetical protein | SAMN05421849_0071 | Not Available | Negative | 60594 - 60926 | 12017.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
