Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-4 | SAMN05421849_1553 | Not Available | Negative | 1561918 - 1563171 | 45444.9 |
| orotidine-5'-phosphate decarboxylase | SAMN05421849_1554 | Not Available | Negative | 1563444 - 1564145 | 24501.7 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN05421849_1555 | Not Available | Positive | 1564360 - 1566978 | 96035.8 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 1567676 - 1569146 | 18.01 |
| Trna-ile | Not Available | Not Available | Positive | 1569282 - 1569355 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1569439 - 1569511 | Not Available |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 1569903 - 1572730 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 1572827 - 1572941 | 18.01 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05421849_1561 | Not Available | Positive | 1573267 - 1574733 | 52074.5 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421849_1562 | Not Available | Negative | 1574770 - 1575543 | 27666.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
