Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase r | SAMN05421849_1481 | Not Available | Negative | 1494361 - 1496613 | 82606.9 |
| hypothetical protein | SAMN05421849_1482 | Not Available | Negative | 1496686 - 1497069 | 13082.3 |
| uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein family | SAMN05421849_1483 | Not Available | Negative | 1497087 - 1497332 | 8258.69 |
| hypothetical protein | SAMN05421849_1484 | Not Available | Positive | 1497604 - 1498476 | 32182.2 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN05421849_1485 | Not Available | Negative | 1498485 - 1499675 | 44000.0 |
| invasion protein ialb, involved in pathogenesis | SAMN05421849_1486 | Not Available | Negative | 1499778 - 1500311 | 18853.1 |
| cysteine-rich secretory protein family protein | SAMN05421849_1487 | Not Available | Positive | 1500680 - 1501192 | 19034.5 |
| l,d-transpeptidase catalytic domain | SAMN05421849_1488 | Not Available | Negative | 1501330 - 1501833 | 18560.2 |
| 23s rrna m(5)u-1939 methyltransferase | SAMN05421849_1489 | Not Available | Negative | 1501931 - 1503157 | 43105.8 |
| atp-binding cassette, subfamily b | SAMN05421849_1490 | Not Available | Negative | 1503154 - 1504986 | 66169.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
