Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421849_1411 | Not Available | Negative | 1411221 - 1411811 | 21399.0 |
| adenosylhomocysteinase | SAMN05421849_1412 | Not Available | Positive | 1411943 - 1413334 | 50409.2 |
| manganese/iron transport system permease protein | SAMN05421849_1413 | Not Available | Negative | 1413406 - 1414239 | 29285.0 |
| manganese/iron transport system permease protein | SAMN05421849_1414 | Not Available | Negative | 1414236 - 1415102 | 30502.4 |
| manganese/iron transport system atp-binding protein | SAMN05421849_1415 | Not Available | Negative | 1415099 - 1416013 | 33274.0 |
| manganese/iron transport system substrate-binding protein | SAMN05421849_1416 | Not Available | Negative | 1416010 - 1416924 | 32547.3 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN05421849_1417 | Not Available | Negative | 1417069 - 1418031 | 33052.2 |
| o-sialoglycoprotein endopeptidase | SAMN05421849_1418 | Not Available | Negative | 1418028 - 1419173 | 39145.5 |
| uroporphyrinogen-iii synthase | SAMN05421849_1419 | Not Available | Positive | 1419212 - 1419937 | 25374.0 |
| hypothetical protein | SAMN05421849_1420 | Not Available | Positive | 1420024 - 1421547 | 52732.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
