Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dephospho-coa kinase | SAMN05421849_1391 | Not Available | Positive | 1390986 - 1391573 | 21093.0 |
| dna polymerase-3 subunit epsilon | SAMN05421849_1392 | Not Available | Positive | 1391566 - 1392240 | 24540.5 |
| protein translocase subunit secb | SAMN05421849_1393 | Not Available | Negative | 1392246 - 1392755 | 19372.0 |
| upf0716 protein fxsa | SAMN05421849_1394 | Not Available | Negative | 1392821 - 1393291 | 17277.7 |
| predicted lipid-binding transport protein, tim44 family | SAMN05421849_1395 | Not Available | Positive | 1393398 - 1394057 | 24104.6 |
| dna-nicking endonuclease, smr domain | SAMN05421849_1396 | Not Available | Positive | 1394079 - 1394654 | 21530.6 |
| atp-dependent hsluv protease atp-binding subunit hslu | SAMN05421849_1397 | Not Available | Negative | 1394673 - 1395980 | 48631.2 |
| hslv component of hsluv peptidase. threonine peptidase. merops family t01b | SAMN05421849_1398 | Not Available | Negative | 1396009 - 1396566 | 19422.2 |
| thioredoxin | SAMN05421849_1399 | Not Available | Negative | 1396601 - 1396924 | 11318.4 |
| dna helicase/exodeoxyribonuclease v, subunit a | SAMN05421849_1400 | Not Available | Negative | 1396961 - 1400371 | 123431.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
