Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase (b12-dependent) | SAMN05421849_1361 | Not Available | Positive | 1354927 - 1357647 | 100809.0 |
| glycosyl transferase family 2 | SAMN05421849_1362 | Not Available | Positive | 1357848 - 1360088 | 82841.0 |
| hdea/hdeb family protein | SAMN05421849_1363 | Not Available | Negative | 1360196 - 1360642 | 14583.9 |
| cd2+/zn2+-exporting atpase | SAMN05421849_1364 | Not Available | Negative | 1360781 - 1362994 | 75801.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421849_1365 | Not Available | Negative | 1363101 - 1363859 | 26394.5 |
| peptide/nickel transport system substrate-binding protein | SAMN05421849_1366 | Not Available | Negative | 1363941 - 1365527 | 58458.8 |
| phosphate:na+ symporter | SAMN05421849_1367 | Not Available | Positive | 1365751 - 1367403 | 60148.8 |
| prc-barrel domain-containing protein | SAMN05421849_1368 | Not Available | Negative | 1367503 - 1368246 | 25116.4 |
| aminomethyltransferase | SAMN05421849_1369 | Not Available | Positive | 1368436 - 1369770 | 49777.1 |
| citrate transporter | SAMN05421849_1370 | Not Available | Positive | 1369849 - 1371633 | 62980.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
