Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN05421849_1209 | Not Available | Negative | 1206026 - 1206691 | 24287.9 |
| glycine/d-amino acid oxidase | SAMN05421849_1210 | Not Available | Positive | 1206750 - 1207802 | 36285.4 |
| outer membrane protein ompa | SAMN05421849_1211 | Not Available | Negative | 1208123 - 1208785 | 22406.7 |
| arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferase | SAMN05421849_1212 | Not Available | Negative | 1208827 - 1209822 | 35595.8 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN05421849_1213 | Not Available | Positive | 1209926 - 1210570 | 23843.9 |
| sugar or nucleoside kinase, ribokinase family | SAMN05421849_1214 | Not Available | Positive | 1210567 - 1211559 | 35067.0 |
| putative (di)nucleoside polyphosphate hydrolase | SAMN05421849_1215 | Not Available | Negative | 1211592 - 1212098 | 19496.3 |
| transcriptional regulator, lysr family | SAMN05421849_1216 | Not Available | Positive | 1212299 - 1213201 | 31377.7 |
| ompa-ompf porin, oop family | SAMN05421849_1217 | Not Available | Negative | 1213281 - 1214204 | 32046.4 |
| acetyltransferase (gnat) family protein | SAMN05421849_1218 | Not Available | Negative | 1214201 - 1214968 | 26413.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
