Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal dependent phosphohydrolase | SAMN05421849_1199 | Not Available | Negative | 1196104 - 1198239 | 79912.9 |
| dna-directed rna polymerase subunit omega | SAMN05421849_1200 | Not Available | Negative | 1198268 - 1198621 | 13178.5 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN05421849_1201 | Not Available | Negative | 1198732 - 1199202 | 17259.1 |
| uncharacterized conserved protein, laba/duf88 family | SAMN05421849_1202 | Not Available | Positive | 1199438 - 1200025 | 22368.6 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN05421849_1203 | Not Available | Positive | 1200202 - 1201161 | 34573.8 |
| protein of unknown function | SAMN05421849_1204 | Not Available | Positive | 1201161 - 1201607 | 15394.5 |
| ribonuclease hi | SAMN05421849_1205 | Not Available | Positive | 1201613 - 1202092 | 17944.5 |
| dihydrodipicolinate synthase | SAMN05421849_1206 | Not Available | Negative | 1202201 - 1203076 | 31017.5 |
| soluble lytic murein transglycosylase | SAMN05421849_1207 | Not Available | Positive | 1203219 - 1205183 | 71485.4 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05421849_1208 | Not Available | Negative | 1205157 - 1206029 | 31640.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
