Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor 1a (ef-1a/ef-tu) | SAMN05421849_1109 | Not Available | Negative | 1106282 - 1107457 | 42920.3 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN05421849_1110 | Not Available | Negative | 1107532 - 1109655 | 78141.4 |
| ssu ribosomal protein s7p | SAMN05421849_1111 | Not Available | Negative | 1109698 - 1110168 | 18126.8 |
| ssu ribosomal protein s12p | SAMN05421849_1112 | Not Available | Negative | 1110181 - 1110552 | 14197.6 |
| putative rhamnosyl transferase | SAMN05421849_1113 | Not Available | Negative | 1110900 - 1111751 | 31887.2 |
| dna-directed rna polymerase subunit beta' | SAMN05421849_1114 | Not Available | Negative | 1111852 - 1116090 | 156751.0 |
| dna-directed rna polymerase subunit beta | SAMN05421849_1115 | Not Available | Negative | 1116194 - 1120330 | 153746.0 |
| lsu ribosomal protein l12p | SAMN05421849_1116 | Not Available | Negative | 1120581 - 1120958 | 12871.5 |
| lsu ribosomal protein l10p | SAMN05421849_1117 | Not Available | Negative | 1121033 - 1121548 | 17611.2 |
| lsu ribosomal protein l1p | SAMN05421849_1118 | Not Available | Negative | 1121860 - 1122558 | 24196.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
