Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiocytidine biosynthesis protein ttca | SAMN05421849_1069 | Not Available | Positive | 1077721 - 1078635 | 34294.4 |
| diguanylate cyclase/phosphodiesterase | SAMN05421849_1070 | Not Available | Positive | 1078702 - 1080273 | 57190.1 |
| protein translocase subunit yidc | SAMN05421849_1071 | Not Available | Positive | 1080363 - 1082180 | 67113.0 |
| gtp-binding protein | SAMN05421849_1072 | Not Available | Positive | 1082248 - 1082901 | 23573.6 |
| n-acetylglutamate kinase | SAMN05421849_1073 | Not Available | Positive | 1082953 - 1083822 | 30090.6 |
| hypothetical protein | SAMN05421849_1074 | Not Available | Positive | 1083819 - 1084511 | 24057.6 |
| l-glutamine-binding protein /l-glutamate-binding protein /l-aspartate-binding protein /l-asparagine-binding protein | SAMN05421849_1075 | Not Available | Negative | 1084490 - 1085617 | 40128.1 |
| chaperone required for the assembly of the f1-atpase | SAMN05421849_1076 | Not Available | Negative | 1085806 - 1086513 | 25898.6 |
| ribosomal large subunit pseudouridine synthase c | SAMN05421849_1077 | Not Available | Negative | 1086510 - 1087565 | 38586.7 |
| camphor resistance protein crcb | SAMN05421849_1078 | Not Available | Negative | 1087562 - 1087969 | 13953.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
