Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pontibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pontibaca |
| Species | Pontibaca methylaminivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | marine biofouling material; marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
444193 bp
Thymine Count
444440 bp
Guanine Count
880469 bp
Cytosine Count
881882 bp
Genome Length
2650984 bp
Protein-coding Genes
2460 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met; | Not Available | Not Available | Positive | 1948419 - 1948492 | Not Available |
| Phosphoribosylaminoimidazole synthetase | SAMN05421849_1929 | Not Available | Positive | 1948600 - 1949649 | 35588.1 |
| Cyanobacterial phosphoribosylglycinamide formyltransferase | SAMN05421849_1930 | Not Available | Positive | 1949646 - 1950236 | 20732.1 |
| Attr | Not Available | Not Available | Positive | 1950364 - 1950376 | Not Available |
| ribonuclease d | SAMN05421849_1931 | Not Available | Positive | 1950369 - 1951523 | 43197.7 |
| hypothetical protein | SAMN05421849_1932 | Not Available | Negative | 1951578 - 1952078 | 17971.3 |
| cysteine desulfuration protein sufe | SAMN05421849_1933 | Not Available | Positive | 1952210 - 1952620 | 15204.2 |
| Integrase | SAMN05421849_1934 | Not Available | Negative | 1952697 - 1953644 | 33891.8 |
| urease accessory protein | SAMN05421849_0001 | Not Available | Positive | 1 - 426 | 15076.0 |
| transposase | SAMN05421849_0004 | Not Available | Negative | 1344 - 2372 | 37873.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
