Butyrivibrio proteoclasticus B316

Gram-positiveRodNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Butyrivibrio

Description

Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) is an anaerobic, polysaccharide-degrading, butyrate-forming rumen, Gram-positive bacterium isolated from the bovine rumen and with a key role in plant polysaccharide degradation. The 4.4Mb genome consists of 4 replicons; a chromosome, a chromid and two megaplasmids. The chromid is the smallest reported for all bacteria, and the first identified from the phylum Firmicutes. B. proteoclasticus devotes a large proportion of its genome to the breakdown and reassembly of complex polysaccharides and has a highly developed glycobiome when compared to other sequenced bacteria. The secretion of a range of polysaccharide-degrading enzymes which initiate the breakdown of pectin, starch and xylan, a subtilisin family protease active against plant proteins, and diverse intracellular enzymes to break down oligosaccharides constitute the degradative capability of this organism. A prominent feature of B. proteoclasticus is the presence of multiple gene clusters predicted to be involved in polysaccharide biosynthesis. Metabolic reconstruction reveals the absence of an identifiable gene for enolase, a conserved enzyme of the glycolytic pathway. This is the first report of an organism lacking an enolase. (Adapted from PMID: 20689770). (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusButyrivibrio
SpeciesButyrivibrio proteoclasticus
StrainB316

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Butyrivibrio proteoclasticus B316
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Butyrivibrio proteoclasticus B316 plasmid pCY186, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-70 family rna polymerase sigma factorBPR_RS09250P02964Negative2237632 - 223825523380.9
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbBPR_RS09255Q06753Negative2238349 - 223909826981.6
mini-ribonuclease 3BPR_RS09260Q890M5Negative2239125 - 223956216145.4
cysteine--trna ligaseBPR_RS09265B8E391Negative2239547 - 224097153897.7
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseBPR_RS09270Q0TMY4Negative2240991 - 224146416918.4
azld domain-containing proteinBPR_RS09275Not AvailableNegative2241518 - 224182611353.7
azlc family abc transporter permeaseBPR_RS09280Not AvailableNegative2241819 - 224253525366.7
alanyl-trna editing proteinBPR_RS09285A8A8X8Negative2242552 - 224378144793.0
card family transcriptional regulatorBPR_RS09290Not AvailableNegative2243884 - 224440219526.7
gnat family n-acetyltransferaseBPR_RS09295Not AvailableNegative2244612 - 224517521283.3

Displaying genes 2061 – 2070 of 3493 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.