Butyrivibrio proteoclasticus B316

Gram-positiveRodNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Butyrivibrio

Description

Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) is an anaerobic, polysaccharide-degrading, butyrate-forming rumen, Gram-positive bacterium isolated from the bovine rumen and with a key role in plant polysaccharide degradation. The 4.4Mb genome consists of 4 replicons; a chromosome, a chromid and two megaplasmids. The chromid is the smallest reported for all bacteria, and the first identified from the phylum Firmicutes. B. proteoclasticus devotes a large proportion of its genome to the breakdown and reassembly of complex polysaccharides and has a highly developed glycobiome when compared to other sequenced bacteria. The secretion of a range of polysaccharide-degrading enzymes which initiate the breakdown of pectin, starch and xylan, a subtilisin family protease active against plant proteins, and diverse intracellular enzymes to break down oligosaccharides constitute the degradative capability of this organism. A prominent feature of B. proteoclasticus is the presence of multiple gene clusters predicted to be involved in polysaccharide biosynthesis. Metabolic reconstruction reveals the absence of an identifiable gene for enolase, a conserved enzyme of the glycolytic pathway. This is the first report of an organism lacking an enolase. (Adapted from PMID: 20689770). (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusButyrivibrio
SpeciesButyrivibrio proteoclasticus
StrainB316

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Butyrivibrio proteoclasticus B316
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Butyrivibrio proteoclasticus B316 plasmid pCY186, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deoxyribose-phosphate aldolaseBPR_RS05435B2V184Negative1302372 - 130303124040.9
aminopeptidase p family proteinBPR_RS05440Q8RY11Positive1303247 - 130507068625.0
yihy/virulence factor brkb family proteinBPR_RS05445Not AvailablePositive1305460 - 130637735314.2
ai-2e family transporterBPR_RS05450O32095Positive1306470 - 130761841926.5
hypothetical proteinBPR_RS05455Not AvailablePositive1307654 - 13078697711.38
endonuclease/exonuclease/phosphatase family proteinBPR_RS05460Not AvailablePositive1307966 - 130905440794.4
6-phosphofructokinaseBPR_RS05465Not AvailablePositive1309155 - 131041446010.1
ggdef domain-containing proteinBPR_RS05470P0AA90Positive1310544 - 131192652425.3
hu family dna-binding proteinBPR_RS05475P0A3H2Positive1312053 - 13123319699.92
eal domain-containing proteinBPR_RS05480P21514Positive1312516 - 131417463191.8

Displaying genes 1291 – 1300 of 3493 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.